STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cuedc2CUE domain containing 2. (281 aa)    
Predicted Functional Partners:
tbp
TATA box binding protein.
   
   0.607
fbxo28
F-box protein 28.
      
 0.536
pgr
Progesterone receptor.
    
 
 0.468
prepl
Prolyl endopeptidase like.
      
 0.461
W5MCJ3_LEPOC
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.453
cuedc1
CUE domain containing 1b.
      
 0.445
tbpl1
TBP-like 1.
   
 
 0.427
tmem150a
Transmembrane protein 150Aa.
      
 0.422
eloc
Elongin C paralog a; Belongs to the SKP1 family.
      
 0.418
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.