STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5ME61_LEPOCNIDO domain-containing protein. (181 aa)    
Predicted Functional Partners:
W5MEX7_LEPOC
Uncharacterized protein.
 
  
  0.786
LOC102695064
VWFD domain-containing protein.
 
  
  0.763
W5N613_LEPOC
Zonadhesin, like.
 
  
  0.637
W5M0D4_LEPOC
SMC5-SMC6 complex localization factor 1.
   
 0.540
W5M2L8_LEPOC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.539
LOC102696124
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.539
ENSLOCP00000017361
annotation not available
    
 0.539
mst1r
Macrophage stimulating 1 receptor b.
    
  0.528
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.528
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.525
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.