Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TWISTNB | W5M8I8_LEPOC | ENSLOCP00000014014 | ENSLOCP00000004696 | TWIST neighbor. | Uncharacterized protein. | 0.699 |
TWISTNB | W5N5C2_LEPOC | ENSLOCP00000014014 | ENSLOCP00000015831 | TWIST neighbor. | RNA polymerase I subunit E. | 0.999 |
TWISTNB | W5NC67_LEPOC | ENSLOCP00000014014 | ENSLOCP00000018226 | TWIST neighbor. | CD3e molecule, epsilon associated protein. | 0.999 |
TWISTNB | gtf2h5 | ENSLOCP00000014014 | ENSLOCP00000020062 | TWIST neighbor. | General transcription factor IIH, polypeptide 5. | 0.668 |
TWISTNB | polr1a | ENSLOCP00000014014 | ENSLOCP00000013348 | TWIST neighbor. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
TWISTNB | polr1b | ENSLOCP00000014014 | ENSLOCP00000020453 | TWIST neighbor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
TWISTNB | polr1c | ENSLOCP00000014014 | ENSLOCP00000020645 | TWIST neighbor. | RNA polymerase I and III subunit C. | 0.999 |
TWISTNB | tbp | ENSLOCP00000014014 | ENSLOCP00000019054 | TWIST neighbor. | TATA box binding protein. | 0.789 |
TWISTNB | ttf1 | ENSLOCP00000014014 | ENSLOCP00000006725 | TWIST neighbor. | Uncharacterized protein. | 0.747 |
W5M8I8_LEPOC | TWISTNB | ENSLOCP00000004696 | ENSLOCP00000014014 | Uncharacterized protein. | TWIST neighbor. | 0.699 |
W5M8I8_LEPOC | W5N5C2_LEPOC | ENSLOCP00000004696 | ENSLOCP00000015831 | Uncharacterized protein. | RNA polymerase I subunit E. | 0.669 |
W5M8I8_LEPOC | W5NC67_LEPOC | ENSLOCP00000004696 | ENSLOCP00000018226 | Uncharacterized protein. | CD3e molecule, epsilon associated protein. | 0.582 |
W5M8I8_LEPOC | gtf2h5 | ENSLOCP00000004696 | ENSLOCP00000020062 | Uncharacterized protein. | General transcription factor IIH, polypeptide 5. | 0.657 |
W5M8I8_LEPOC | polr1a | ENSLOCP00000004696 | ENSLOCP00000013348 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.677 |
W5M8I8_LEPOC | polr1b | ENSLOCP00000004696 | ENSLOCP00000020453 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.688 |
W5M8I8_LEPOC | polr1c | ENSLOCP00000004696 | ENSLOCP00000020645 | Uncharacterized protein. | RNA polymerase I and III subunit C. | 0.655 |
W5M8I8_LEPOC | tbp | ENSLOCP00000004696 | ENSLOCP00000019054 | Uncharacterized protein. | TATA box binding protein. | 0.890 |
W5M8I8_LEPOC | ttf1 | ENSLOCP00000004696 | ENSLOCP00000006725 | Uncharacterized protein. | Uncharacterized protein. | 0.741 |
W5N5C2_LEPOC | TWISTNB | ENSLOCP00000015831 | ENSLOCP00000014014 | RNA polymerase I subunit E. | TWIST neighbor. | 0.999 |
W5N5C2_LEPOC | W5M8I8_LEPOC | ENSLOCP00000015831 | ENSLOCP00000004696 | RNA polymerase I subunit E. | Uncharacterized protein. | 0.669 |
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