STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lypla1Lysophospholipase 1. (243 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.883
W5MLS2_LEPOC
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
   
 
 0.874
lpcat1
Lysophosphatidylcholine acyltransferase 1.
    
 0.869
pla2g4a
Phospholipase A2.
     
 0.866
LOC102688887
Retinoic acid receptor responder 3-like.
     
 0.862
lpcat2
Lysophosphatidylcholine acyltransferase 2.
    
 0.862
pla2g10
Phospholipase A(2).
     
 0.861
pnpla7
Patatin-like phospholipase domain containing 7b.
    
  0.857
LOC102698342
Patatin-like phospholipase domain containing 6.
    
  0.857
W5N0D4_LEPOC
Phospholipase A2, group VI (cytosolic, calcium-independent).
    
 0.820
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.