STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pomgnt1Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-). (665 aa)    
Predicted Functional Partners:
W5MGM1_LEPOC
Protein-O-mannosyltransferase 1.
     
 0.939
pomt2
Protein-O-mannosyltransferase 2.
     
 0.939
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.937
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
     
 0.927
LOC102696232
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
   
 0.873
W5M3Z1_LEPOC
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
   
 0.873
LOC102682343
Si:dkey-199f5.8.
   
 0.873
B4GALT1
Beta-1,4-galactosyltransferase 1.
   
 0.809
W5N0C5_LEPOC
Uncharacterized protein.
   
 0.809
dag1
Dystroglycan 1.
     
 0.792
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.