STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MET7_LEPOCPolymerase (DNA directed), theta. (2592 aa)    
Predicted Functional Partners:
fancd2
FA complementation group D2.
   
 0.809
FANCM
FA complementation group M.
   
 
 0.804
W5M9S6_LEPOC
XPGI domain-containing protein.
  
 
 0.778
rnaseh1
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 0.775
twnk
Twinkle mtDNA helicase.
   
 
 0.760
W5NIU6_LEPOC
Exonuclease 1.
  
 
 0.757
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.753
fanci
FA complementation group I.
   
 0.714
W5N048_LEPOC
Uncharacterized protein.
   
 0.707
neil3
Nei-like DNA glycosylase 3.
  
  
 0.706
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.