STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MEU6_LEPOCWSC domain containing 1b. (584 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.999
cenpw
Si:ch211-195p4.4.
   
 0.918
W5M0X5_LEPOC
FA core complex associated protein 24.
    
 0.844
pop4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.836
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.835
cenpq
Uncharacterized protein.
   
 0.835
rpp30
Ribonuclease P/MRP 30 subunit.
    
 0.834
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.834
ercc4
Excision repair cross-complementation group 4.
   
 0.833
W5MHY9_LEPOC
FA complementation group G.
    
 0.829
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.