STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MEX0_LEPOCKRAP_IP3R_bind domain-containing protein. (579 aa)    
Predicted Functional Partners:
LOC107076746
Uncharacterized protein.
   
  
 0.610
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
      
 0.544
rnf34
Ring finger protein 34b.
      
 0.538
W5MVZ9_LEPOC
Transcription factor 7.
      
 0.535
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
      
 0.512
W5LX90_LEPOC
Androgen-induced 1 (H. sapiens).
      
 0.479
RBM33
RNA binding motif protein 33.
      
 0.406
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.