STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lhfpl2LHFPL tetraspan subfamily member 2b. (220 aa)    
Predicted Functional Partners:
W5MTW9_LEPOC
Protocadherin 7b.
    
  0.589
pcdh1
Protocadherin 1a.
    
  0.589
aplp2
Amyloid beta (A4) precursor-like protein 2.
     
 0.583
W5MXT3_LEPOC
Amyloid beta (A4) precursor protein b.
     
 0.527
W5NGH4_LEPOC
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 
  0.522
W5M8N9_LEPOC
Amyloid beta (A4) precursor-like protein 1.
     
 0.519
pcdh9
Protocadherin 9.
    
  0.458
pcdh17
Protocadherin 17.
    
  0.458
LOC102694704
Protocadherin 8.
    
  0.458
LOC102694898
Protocadherin 8.
    
  0.458
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.