gpbp1l1 protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

gpbp1l1

GC-rich promoter binding protein 1-like 1. (498 aa)

Predicted Functional Partners:

tmem69

0.560

cnot2

0.430

W5MFJ1_LEPOC

0.424

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5MFJ1_LEPOC	cnot2	ENSLOCP00000007150	ENSLOCP00000019993	Coiled-coil domain containing 17.	CCR4-NOT transcription complex, subunit 2.	0.622
W5MFJ1_LEPOC	gpbp1l1	ENSLOCP00000007150	ENSLOCP00000007130	Coiled-coil domain containing 17.	GC-rich promoter binding protein 1-like 1.	0.424
cnot2	W5MFJ1_LEPOC	ENSLOCP00000019993	ENSLOCP00000007150	CCR4-NOT transcription complex, subunit 2.	Coiled-coil domain containing 17.	0.622
cnot2	gpbp1l1	ENSLOCP00000019993	ENSLOCP00000007130	CCR4-NOT transcription complex, subunit 2.	GC-rich promoter binding protein 1-like 1.	0.430
gpbp1l1	W5MFJ1_LEPOC	ENSLOCP00000007130	ENSLOCP00000007150	GC-rich promoter binding protein 1-like 1.	Coiled-coil domain containing 17.	0.424
gpbp1l1	cnot2	ENSLOCP00000007130	ENSLOCP00000019993	GC-rich promoter binding protein 1-like 1.	CCR4-NOT transcription complex, subunit 2.	0.430
gpbp1l1	tmem69	ENSLOCP00000007130	ENSLOCP00000007101	GC-rich promoter binding protein 1-like 1.	Transmembrane protein 69.	0.560
tmem69	gpbp1l1	ENSLOCP00000007101	ENSLOCP00000007130	Transmembrane protein 69.	GC-rich promoter binding protein 1-like 1.	0.560