STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP9Rho GTPase activating protein 9. (838 aa)    
Predicted Functional Partners:
myo9b
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.693
myo9a
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
0.693
cdc42
Cell division cycle 42.
   
 0.578
rhof
Ras homolog family member F.
    
 0.578
rnd3
Rho family GTPase 3b.
    
 0.566
rnd1
Rho family GTPase 1a.
    
 0.566
rhoc
Ras homolog family member Cb.
    
 0.566
LOC102682211
Ras homolog gene family, member Ab.
    
 0.566
W5NAW2_LEPOC
Ras homolog gene family, member Ab.
    
 0.566
rhob
Uncharacterized protein.
    
 0.566
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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