STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MFH6_LEPOCGATA binding protein 5. (383 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 0.895
srf
Serum response factor b.
    
 0.820
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.784
zfpm2
Zinc finger protein, FOG family member 2a.
    
 0.776
zfpm1
Zinc finger protein, FOG family member 1.
   
 0.760
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.739
LOC102694913
Uncharacterized protein.
     
 0.727
LOC102687572
T-cell acute lymphocytic leukemia 1.
   
 0.727
sqstm1
Sequestosome 1.
    
 0.727
nfatc1
Nuclear factor of activated T cells 1.
    
 0.722
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.