STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MFV4_LEPOCPhosphatidylinositol glycan anchor biosynthesis, class S. (489 aa)    
Predicted Functional Partners:
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
   
 0.999
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 0.999
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.999
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
   
 0.998
W5MA65_LEPOC
Phosphatidylinositol glycan anchor biosynthesis, class O.
   
 0.941
W5MD90_LEPOC
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
    
 0.915
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
     
 0.889
W5MD63_LEPOC
Uncharacterized protein.
    
 0.873
W5MSI0_LEPOC
Uncharacterized protein.
     
  0.849
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
   
 0.615
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.