STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102684596Interferon-induced protein with tetratricopeptide repeats 9. (483 aa)    
Predicted Functional Partners:
W5NG38_LEPOC
Uncharacterized protein.
   
 0.939
leo1
Uncharacterized protein.
    
 0.934
eif3e
Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 0.895
ak9
Adenylate kinase 9.
   
 0.881
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
   
  0.869
eif2ak1
Eukaryotic translation initiation factor 2-alpha kinase 1.
    
 0.862
W5NNN7_LEPOC
Uncharacterized protein.
   
 0.828
usp18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 0.808
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.802
W5N4K6_LEPOC
Uncharacterized protein.
    
  0.785
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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