STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btdBiotinidase. (514 aa)    
Predicted Functional Partners:
HLCS
Holocarboxylase synthetase.
    
 0.907
glud1
Glutamate dehydrogenase 1a; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.894
W5NG10_LEPOC
Aminoadipate-semialdehyde synthase.
    
  0.875
pank4
Pantothenate kinase 4; Belongs to the type II pantothenate kinase family.
     
 0.873
W5M1K4_LEPOC
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
 0.857
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
 0.855
W5MSQ5_LEPOC
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
    
 0.825
dao
D-amino-acid oxidase, tandem duplicate 2.
  
 
 0.823
W5N4K7_LEPOC
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
  0.811
mdh2
Malate dehydrogenase.
    
 0.799
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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