STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mylk2Protein kinase domain-containing protein. (735 aa)    
Predicted Functional Partners:
LOC102694319
Myosin, light chain 9a, regulatory.
   
 0.909
MYL6B
Myosin light chain 6B.
   
 0.909
LOC102691547
Myosin, light chain 12, genome duplicate 1.
   
 0.903
myl7
Myosin, light chain 7, regulatory.
   
 0.900
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.893
myl3
Myosin, light chain 13.
   
 0.891
CALML6
Calmodulin like 6.
   
 0.887
W5N977_LEPOC
Calmodulin-like 4b.
   
  0.887
pak6
Non-specific serine/threonine protein kinase.
  
  
 
0.872
W5NAN1_LEPOC
Non-specific serine/threonine protein kinase.
  
  
 
0.872
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.