STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MGG2_LEPOCSi:dkey-21c19.3. (730 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin-related modifier.
    
 0.970
sumo3
Small ubiquitin-related modifier.
    
 0.951
sumo2
Small ubiquitin-related modifier.
    
 0.951
ipo5
Karyopherin (importin) beta 3.
    
 
 0.933
W5MNS7_LEPOC
Nucleoporin 153.
   
 0.874
W5N0R9_LEPOC
RAN GTPase activating protein 1a.
    
 
 0.869
senp7
SUMO specific peptidase 7.
    
0.862
SENP6
SUMO specific peptidase 6.
    
0.862
kpnb1
Karyopherin (importin) beta 1.
   
 
 0.823
W5M4V5_LEPOC
Dishevelled segment polarity protein 1a.
    
  0.786
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.