STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl48Mitochondrial ribosomal protein L48. (210 aa)    
Predicted Functional Partners:
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.969
mrpl51
Mitochondrial ribosomal protein L51.
   
 
 0.968
W5M1B9_LEPOC
Mitochondrial ribosomal protein L40.
   
 
 0.966
mrps22
Mitochondrial ribosomal protein S22.
   
 
 0.961
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.960
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.955
mrps33
Mitochondrial ribosomal protein S33.
   
   0.955
mrpl35
Mitochondrial ribosomal protein L35.
   
   0.952
W5NB71_LEPOC
MRP-L46 domain-containing protein.
   
   0.952
W5MH32_LEPOC
Death associated protein 3.
   
 
 0.949
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.