STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MGG9_LEPOCEyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (445 aa)    
Predicted Functional Partners:
six1
SIX homeobox 1b.
   
 
 0.656
SIX4
SIX homeobox 4.
   
 
 0.650
LOC102688351
Homeobox domain-containing protein.
   
 
 0.650
six5
SIX homeobox 5.
   
 
 0.650
six2
SIX homeobox 2a.
   
 
 0.650
LOC102694060
SIX homeobox 7.
   
 
 0.638
six6
SIX homeobox 6a.
   
 
 0.638
six3
SIX homeobox 3a.
   
 
 0.638
eya3
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
  
  
 
0.572
dach1
Dachshund d.
    
 
 0.534
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.