STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102692515Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
W5MM15_LEPOC
Uncharacterized protein.
   
  
 0.634
tdrd7
Tudor domain containing 7 a.
    
   0.596
W5N037_LEPOC
Uncharacterized protein.
   
  
 0.566
W5N9G1_LEPOC
UF2 component of NDC80 kinetochore complex.
   
  
 0.547
PSRC1
Proline and serine rich coiled-coil 1.
   
  
 0.543
birc5
Baculoviral IAP repeat containing 5a.
   
  
 0.541
CDC20B
Cell division cycle 20B.
   
 
 0.521
cdc20
Cell division cycle 20 homolog.
   
 
 0.521
ncapd2
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
  
 0.508
W5NJ26_LEPOC
Uncharacterized protein.
   
  
 0.505
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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