STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk11aCyclin-dependent kinase 11B. (800 aa)    
Predicted Functional Partners:
ccnc
Cyclin C; Belongs to the cyclin family.
     
 0.655
ywhae
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1; Belongs to the 14-3-3 family.
    
 0.644
W5MEP5_LEPOC
Uncharacterized protein.
     
 0.618
W5M015_LEPOC
Testis specific, 10; Belongs to the cullin family.
    
 0.608
W5MXV0_LEPOC
Centromere protein J.
    
 0.608
CEP135
Centrosomal protein 135.
    
 0.608
W5NFG0_LEPOC
Tcp10_C domain-containing protein.
    
 0.608
cep63
CEP63 domain-containing protein.
     
 0.604
mapre1
Microtubule-associated protein, RP/EB family, member 1a.
   
 
  0.603
W5N0I2_LEPOC
SAP30 binding protein.
   
   0.596
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.