STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
e2f4E2F transcription factor 4. (409 aa)    
Predicted Functional Partners:
rb1
Retinoblastoma 1.
   
 0.994
rbl2
Retinoblastoma-like 2 (p130).
   
 0.992
rbl1
Retinoblastoma-like 1 (p107).
   
 0.992
tfdp2
Transcription factor.
   
 0.989
tfdp1
Transcription factor.
   
 0.989
e2f3
E2F transcription factor 3.
  
 
0.975
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.949
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.937
W5LYD5_LEPOC
E2F transcription factor 1.
  
 
0.935
lin54
Lin-54 DREAM MuvB core complex component.
   
 0.935
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.