STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamc3Laminin, gamma 3. (1604 aa)    
Predicted Functional Partners:
LAMB3
Laminin subunit beta 3.
   
0.933
lamb1
Laminin, beta 1a.
   
0.930
lamb2
Laminin, beta 2 (laminin S).
   
0.927
W5N6F6_LEPOC
Laminin, beta 2-like.
   
0.923
W5M522_LEPOC
Laminin, alpha 1.
   
0.873
LAMA2
Laminin subunit alpha 2.
   
0.873
LAMA3
Laminin subunit alpha 3.
   
0.871
lama5
Laminin, alpha 5.
   
0.871
LAMA4
Laminin subunit alpha 4.
   
0.871
itga3
Integrin, alpha 3a; Belongs to the integrin alpha chain family.
   
 0.864
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.