KIF18A protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KIF18A

Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (813 aa)

Predicted Functional Partners:

kif11

0.980

kif23

0.974

W5M7J5_LEPOC

0.973

W5MIP4_LEPOC

0.965

KIF15

0.959

mad2l1

0.955

kif14

0.928

kifbp

0.926

BUB1B

0.926

W5N9G1_LEPOC

0.926

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BUB1B	KIF15	ENSLOCP00000015810	ENSLOCP00000002550	BUB1 N-terminal domain-containing protein.	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.883
BUB1B	KIF18A	ENSLOCP00000015810	ENSLOCP00000007710	BUB1 N-terminal domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.926
BUB1B	W5M7J5_LEPOC	ENSLOCP00000015810	ENSLOCP00000004353	BUB1 N-terminal domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.843
BUB1B	W5MIP4_LEPOC	ENSLOCP00000015810	ENSLOCP00000008253	BUB1 N-terminal domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.984
BUB1B	W5N9G1_LEPOC	ENSLOCP00000015810	ENSLOCP00000017270	BUB1 N-terminal domain-containing protein.	UF2 component of NDC80 kinetochore complex.	0.983
BUB1B	kif11	ENSLOCP00000015810	ENSLOCP00000008576	BUB1 N-terminal domain-containing protein.	Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.983
BUB1B	kif14	ENSLOCP00000015810	ENSLOCP00000009329	BUB1 N-terminal domain-containing protein.	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.746
BUB1B	kif23	ENSLOCP00000015810	ENSLOCP00000017258	BUB1 N-terminal domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.906
BUB1B	mad2l1	ENSLOCP00000015810	ENSLOCP00000013242	BUB1 N-terminal domain-containing protein.	MAD2 mitotic arrest deficient-like 1 (yeast).	0.999
KIF15	BUB1B	ENSLOCP00000002550	ENSLOCP00000015810	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BUB1 N-terminal domain-containing protein.	0.883
KIF15	KIF18A	ENSLOCP00000002550	ENSLOCP00000007710	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.959
KIF15	W5M7J5_LEPOC	ENSLOCP00000002550	ENSLOCP00000004353	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.950
KIF15	W5MIP4_LEPOC	ENSLOCP00000002550	ENSLOCP00000008253	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.942
KIF15	W5N9G1_LEPOC	ENSLOCP00000002550	ENSLOCP00000017270	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	UF2 component of NDC80 kinetochore complex.	0.862
KIF15	kif11	ENSLOCP00000002550	ENSLOCP00000008576	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.979
KIF15	kif14	ENSLOCP00000002550	ENSLOCP00000009329	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.927
KIF15	kif23	ENSLOCP00000002550	ENSLOCP00000017258	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.932
KIF15	kifbp	ENSLOCP00000002550	ENSLOCP00000011145	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kif1 binding protein.	0.942
KIF15	mad2l1	ENSLOCP00000002550	ENSLOCP00000013242	Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	MAD2 mitotic arrest deficient-like 1 (yeast).	0.446
KIF18A	BUB1B	ENSLOCP00000007710	ENSLOCP00000015810	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BUB1 N-terminal domain-containing protein.	0.926