STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MHE4_LEPOCChromobox homolog 5 (HP1 alpha homolog, Drosophila). (188 aa)    
Predicted Functional Partners:
W5NAU2_LEPOC
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.920
mbtd1
Mbt domain containing 1.
    
 0.827
W5N0R2_LEPOC
FCS-type domain-containing protein.
    
 0.827
LOC102698732
Si:ch211-195d17.2.
   
 0.811
W5LVR2_LEPOC
Uncharacterized protein.
    
 0.797
LOC107076255
ANK_REP_REGION domain-containing protein.
    
 0.797
W5M0N2_LEPOC
Euchromatic histone-lysine N-methyltransferase 1b.
    
 0.797
LOC102684155
Histone H3; Belongs to the histone H3 family.
   
 0.781
LOC102694570
Selenoprotein H.
   
 0.781
W5MA18_LEPOC
Histone domain-containing protein.
   
 0.781
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.