STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MHI9_LEPOCDeoxyribonuclease; Belongs to the DNase I family. (285 aa)    
Predicted Functional Partners:
sin3b
SIN3 transcription regulator family member B.
    
 0.663
W5ND19_LEPOC
SIN3 transcription regulator family member Aa.
    
 0.663
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.639
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.617
LOC102682818
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.611
optn
Optineurin.
   
 0.611
chuk
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.607
W5N321_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.607
W5NF13_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.607
tbk1
TANK-binding kinase 1.
    
 0.607
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.