STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MHR5_LEPOCUncharacterized protein. (148 aa)    
Predicted Functional Partners:
W5N281_LEPOC
Activating transcription factor 7 interacting protein.
   
 0.948
arl14ep
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.854
W5NAU2_LEPOC
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.809
W5MF61_LEPOC
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.787
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.785
LOC102698683
SET domain and mariner transposase fusion gene.
    
 0.776
W5NKG3_LEPOC
PR domain containing 4.
   
 0.768
W5LWX1_LEPOC
C2H2-type domain-containing protein.
   
 0.765
prdm5
Zinc finger protein.
   
 0.764
W5NEJ9_LEPOC
Lysine (K)-specific methyltransferase 2E.
    
 0.764
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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