STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efhbEF-hand domain family, member B. (584 aa)    
Predicted Functional Partners:
W5M6P3_LEPOC
WD repeat domain 90.
    
   0.990
W5ND57_LEPOC
Enkurin, TRPC channel interacting protein.
   
 
 0.930
pacrg
PARK2 co-regulated.
   
   0.924
efhc1
EF-hand domain (C-terminal) containing 1.
   
   0.901
W5M1L2_LEPOC
EF-hand domain (C-terminal) containing 2.
   
   0.901
clg25h1orf158
Si:ch211-226m7.4.
   
   0.887
mns1
Meiosis-specific nuclear structural 1.
    
 
 0.872
cfap52
Cilia and flagella associated protein 52.
   
   0.868
LOC102686996
Cilia and flagella associated protein 126.
   
   0.867
cfap45
Cilia and flagella associated protein 45.
   
   0.865
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.