STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmm2Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (255 aa)    
Predicted Functional Partners:
W5M225_LEPOC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.944
mpi
Mannose-6-phosphate isomerase.
  
 
 0.941
gmppb
GDP-mannose pyrophosphorylase B.
  
 
 0.920
gmppa
GDP-mannose pyrophosphorylase Aa.
  
 
 0.897
rfk
Riboflavin kinase.
   
 0.891
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.890
yipf6
Protein YIPF.
    
 0.882
tk1
Thymidine kinase.
   
 
 0.881
LOC102687446
Zgc:136439.
  
 
 0.868
tymp
Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
    
  0.861
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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