STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102688903Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (274 aa)    
Predicted Functional Partners:
W5MLA0_LEPOC
Aquaporin 10b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.735
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.715
katnal1
Katanin p60 ATPase-containing subunit A-like 1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily. A-like 1 sub-subfamily.
  
 0.695
KATNA1
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
  
 0.695
shpk
Sedoheptulokinase.
  
 
 0.673
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
  
 
 0.673
W5MR54_LEPOC
FGGY carbohydrate kinase domain containing.
  
 
 0.673
W5MRH9_LEPOC
Proteasome 26S subunit, ATPase 1a; Belongs to the AAA ATPase family.
  
 
 0.673
atad2
Bromo domain-containing protein.
  
 
 0.673
GK3P
Glycerol kinase 3 pseudogene; Belongs to the FGGY kinase family.
  
 
 0.673
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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