STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2E1Ubiquitin conjugating enzyme E2 E1. (125 aa)    
Predicted Functional Partners:
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.998
W5MNK9_LEPOC
Thyroid hormone receptor interactor 12.
   
 0.964
FANCM
FA complementation group M.
    
 0.906
rps27a
Ribosomal protein S27a.
    
 0.862
W5MSZ0_LEPOC
Zinc finger, AN1-type domain 4.
   
 0.852
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.845
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.842
birc6
Baculoviral IAP repeat containing 6.
   
 0.828
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
   
 0.824
fam89a
Family with sequence similarity 89 member A.
    
 0.823
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.