STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syt11Synaptotagmin XIb. (439 aa)    
Predicted Functional Partners:
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
   
 0.759
W5LX71_LEPOC
Uncharacterized protein.
 
 
 
  0.751
W5M3Z5_LEPOC
Vesicle-associated membrane protein 3 (cellubrevin).
    
 0.741
W5MIZ2_LEPOC
C2 domain-containing protein.
   
0.737
LOC102685996
Synaptotagmin IIa.
   
0.737
SYT1
Synaptotagmin Ia.
   
0.737
itsn2
Intersectin 2b.
     
 0.712
W5MJL8_LEPOC
V-SNARE coiled-coil homology domain-containing protein.
   
 0.686
vamp1
V-SNARE coiled-coil homology domain-containing protein.
   
 0.686
VAMP2
Vesicle associated membrane protein 2.
   
 0.686
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.