STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MJ86_LEPOCUncharacterized protein. (727 aa)    
Predicted Functional Partners:
W5MFS7_LEPOC
Cell division cycle associated 8.
   
 0.999
birc5
Baculoviral IAP repeat containing 5a.
   
 0.996
aurkb
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.996
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.995
LOC102696960
Uncharacterized protein.
   
 0.989
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.981
RANBP2
RAN binding protein 2.
   
 
  0.976
kif23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.947
plk3
Serine/threonine-protein kinase PLK.
   
 0.899
PLK1
Serine/threonine-protein kinase PLK.
   
 0.899
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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