STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102684571Zgc:171704. (219 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.926
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.873
W5M8L8_LEPOC
Si:dkey-34e4.1.
    
 0.836
nos1ap
Nitric oxide synthase 1 (neuronal) adaptor protein a.
    
 0.836
W5NJB2_LEPOC
Uncharacterized protein.
   
 0.799
SHANK3
SH3 and multiple ankyrin repeat domains 3a.
   
 0.799
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 0.785
mst1r
Macrophage stimulating 1 receptor b.
   
 0.737
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.737
myo9b
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.651
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.