STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rasgef1bRasGEF domain family, member 1Ba. (480 aa)    
Predicted Functional Partners:
rapgef2
Si:dkey-253i9.4.
    
 
0.626
sos2
Son of sevenless homolog 2 (Drosophila).
    
0.532
sos1
Son of sevenless homolog 1 (Drosophila).
    
 
0.523
W5LZ10_LEPOC
Ral GEF with PH domain and SH3 binding motif 1.
   
 
0.432
rasgrf2
Ras protein-specific guanine nucleotide-releasing factor 2b.
   
 
0.432
ralgps2
Ral GEF with PH domain and SH3 binding motif 2.
   
 
0.432
RASGRF1
Ras protein specific guanine nucleotide releasing factor 1.
   
 
0.432
RASGEF1C
RasGEF domain family member 1C.
  
 
 
0.409
RASGRP1
RAS guanyl releasing protein 1.
    
0.407
RASGRP4
RAS guanyl releasing protein 4.
    
0.407
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.