STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MJT3_LEPOCUncharacterized protein. (204 aa)    
Predicted Functional Partners:
alkbh5
AlkB homolog 5, RNA demethylase.
     
 0.863
alkbh1
AlkB homolog 1, histone H2A dioxygenase.
     
 0.806
alkbh8
AlkB homolog 8, tRNA methyltransferase.
     
 0.750
alkbh7
AlkB homolog 7.
     
 0.697
ssx2ip
Synovial sarcoma, X breakpoint 2 interacting protein a.
     
 0.685
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
      
 0.583
wtap
WT1 associated protein.
      
 0.577
W5NNQ3_LEPOC
Melanocortin 4 receptor.
      
 0.562
ythdf1
YTH N(6)-methyladenosine RNA binding protein 1.
      
 0.553
YTHDC2
YTH domain containing 2.
      
 0.550
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.