STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102685166Uncharacterized protein. (430 aa)    
Predicted Functional Partners:
cul1
Cullin 1a; Belongs to the cullin family.
    
 0.941
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.912
W5MKC8_LEPOC
Zgc:123107.
  
  
  0.887
LOC102695421
Tyrosine-protein kinase.
   
 0.886
syk
Tyrosine-protein kinase.
   
 0.886
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.876
LOC107076178
Si:zfos-2070c2.3.
  
 0.876
W5MLD6_LEPOC
Si:dkey-92i15.4.
    
  0.866
IL16
Interleukin 16.
    
  0.858
LOC102686718
Ig-like domain-containing protein.
   
 0.848
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.