STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MKC8_LEPOCZgc:123107. (210 aa)    
Predicted Functional Partners:
LOC107076178
Si:zfos-2070c2.3.
 
 
0.922
LOC102686718
Ig-like domain-containing protein.
 
 
0.920
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.905
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.905
LOC102685166
Uncharacterized protein.
  
  
  0.887
W5N7C6_LEPOC
Uncharacterized protein.
    
  0.871
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.733
W5LXQ5_LEPOC
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
    
  0.732
CD247
CD247 molecule.
   
 
 0.692
LOC102694874
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.591
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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