STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MKK2_LEPOCAtrophin 1. (1461 aa)    
Predicted Functional Partners:
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
  0.835
rbpj
Recombination signal binding protein for immunoglobulin kappa J region b.
    
  0.835
fat2
FAT atypical cadherin 2.
    
 0.735
fat1
FAT atypical cadherin 1a.
    
 0.735
fat3
FAT atypical cadherin 3a.
    
 0.684
nr2e3
Nuclear receptor subfamily 2, group E, member 3.
    
 0.680
nr2e1
Nuclear receptor subfamily 2, group E, member 1.
    
 0.680
W5N0P4_LEPOC
E1A binding protein p300 a.
   
 0.676
crebbp
CREB binding protein b.
   
 0.629
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.614
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.