Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR5 | LOC102695873 | ENSLOCP00000007736 | ENSLOCP00000013382 | Actin related protein 5; Belongs to the actin family. | Excision repair cross-complementation group 3. | 0.557 |
ACTR5 | SHROOM2 | ENSLOCP00000007736 | ENSLOCP00000008921 | Actin related protein 5; Belongs to the actin family. | Shroom family member 2. | 0.676 |
ACTR5 | actr8 | ENSLOCP00000007736 | ENSLOCP00000017444 | Actin related protein 5; Belongs to the actin family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.998 |
ACTR5 | ruvbl1 | ENSLOCP00000007736 | ENSLOCP00000017884 | Actin related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.999 |
LOC102695765 | LOC102695873 | ENSLOCP00000005192 | ENSLOCP00000013382 | General transcription factor IIH subunit. | Excision repair cross-complementation group 3. | 0.999 |
LOC102695765 | LOC107075828 | ENSLOCP00000005192 | ENSLOCP00000008240 | General transcription factor IIH subunit. | BSD domain-containing protein. | 0.999 |
LOC102695765 | SHROOM2 | ENSLOCP00000005192 | ENSLOCP00000008921 | General transcription factor IIH subunit. | Shroom family member 2. | 0.634 |
LOC102695765 | gtf2h3 | ENSLOCP00000005192 | ENSLOCP00000007109 | General transcription factor IIH subunit. | General transcription factor IIH, polypeptide 3. | 0.999 |
LOC102695873 | ACTR5 | ENSLOCP00000013382 | ENSLOCP00000007736 | Excision repair cross-complementation group 3. | Actin related protein 5; Belongs to the actin family. | 0.557 |
LOC102695873 | LOC102695765 | ENSLOCP00000013382 | ENSLOCP00000005192 | Excision repair cross-complementation group 3. | General transcription factor IIH subunit. | 0.999 |
LOC102695873 | LOC107075828 | ENSLOCP00000013382 | ENSLOCP00000008240 | Excision repair cross-complementation group 3. | BSD domain-containing protein. | 0.999 |
LOC102695873 | SHROOM2 | ENSLOCP00000013382 | ENSLOCP00000008921 | Excision repair cross-complementation group 3. | Shroom family member 2. | 0.647 |
LOC102695873 | gtf2h3 | ENSLOCP00000013382 | ENSLOCP00000007109 | Excision repair cross-complementation group 3. | General transcription factor IIH, polypeptide 3. | 0.999 |
LOC107075828 | LOC102695765 | ENSLOCP00000008240 | ENSLOCP00000005192 | BSD domain-containing protein. | General transcription factor IIH subunit. | 0.999 |
LOC107075828 | LOC102695873 | ENSLOCP00000008240 | ENSLOCP00000013382 | BSD domain-containing protein. | Excision repair cross-complementation group 3. | 0.999 |
LOC107075828 | SHROOM2 | ENSLOCP00000008240 | ENSLOCP00000008921 | BSD domain-containing protein. | Shroom family member 2. | 0.652 |
LOC107075828 | gtf2h3 | ENSLOCP00000008240 | ENSLOCP00000007109 | BSD domain-containing protein. | General transcription factor IIH, polypeptide 3. | 0.999 |
LOC107075828 | polrmt | ENSLOCP00000008240 | ENSLOCP00000006293 | BSD domain-containing protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.493 |
SHROOM2 | ACTR5 | ENSLOCP00000008921 | ENSLOCP00000007736 | Shroom family member 2. | Actin related protein 5; Belongs to the actin family. | 0.676 |
SHROOM2 | LOC102695765 | ENSLOCP00000008921 | ENSLOCP00000005192 | Shroom family member 2. | General transcription factor IIH subunit. | 0.634 |
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