STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnikTRAF2 and NCK interacting kinase a. (1474 aa)    
Predicted Functional Partners:
map3k1
Mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase.
    
0.729
W5LYQ5_LEPOC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.707
nrk
Si:zfos-2326c3.2.
  
  
 
0.694
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
0.598
W5ML23_LEPOC
Uncharacterized protein.
    
 
0.591
rnf41
Ring finger protein 41.
    
  0.534
MAP3K11
Mitogen-activated protein kinase kinase kinase 11.
   
 
0.524
fpgt
TNNI3 interacting kinase.
   
 
0.524
map3k9
Mitogen-activated protein kinase kinase kinase.
   
 
0.524
W5NBI8_LEPOC
Mitogen-activated protein kinase kinase kinase 10.
   
 
0.524
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.