ro60 protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

ro60

Ro60, Y RNA binding protein. (542 aa)

Predicted Functional Partners:

ssb

0.805

xpot

0.491

W5MV15_LEPOC

0.489

W5MZF6_LEPOC

0.426

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5MV15_LEPOC	ro60	ENSLOCP00000012224	ENSLOCP00000008959	Uncharacterized protein.	Ro60, Y RNA binding protein.	0.489
W5MZF6_LEPOC	ro60	ENSLOCP00000013765	ENSLOCP00000008959	Histidyl-tRNA synthetase.	Ro60, Y RNA binding protein.	0.426
ro60	W5MV15_LEPOC	ENSLOCP00000008959	ENSLOCP00000012224	Ro60, Y RNA binding protein.	Uncharacterized protein.	0.489
ro60	W5MZF6_LEPOC	ENSLOCP00000008959	ENSLOCP00000013765	Ro60, Y RNA binding protein.	Histidyl-tRNA synthetase.	0.426
ro60	ssb	ENSLOCP00000008959	ENSLOCP00000009634	Ro60, Y RNA binding protein.	Small RNA binding exonuclease protection factor La.	0.805
ro60	xpot	ENSLOCP00000008959	ENSLOCP00000020399	Ro60, Y RNA binding protein.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.491
ssb	ro60	ENSLOCP00000009634	ENSLOCP00000008959	Small RNA binding exonuclease protection factor La.	Ro60, Y RNA binding protein.	0.805
xpot	ro60	ENSLOCP00000020399	ENSLOCP00000008959	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Ro60, Y RNA binding protein.	0.491