STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txlngTaxilin gamma. (438 aa)    
Predicted Functional Partners:
W5LZX4_LEPOC
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.651
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.651
stx2
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.651
stx4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.649
W5NHL5_LEPOC
Syntaxin 11b, tandem duplicate 2.
    
 0.564
LOC102682483
Syntaxin 11a; Belongs to the syntaxin family.
    
 0.564
W5MNV5_LEPOC
Xin actin binding repeat containing 2a.
    
 0.527
LOC102693428
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.527
STX19
Syntaxin 19; Belongs to the syntaxin family.
    
 0.515
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
      
 0.511
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.