STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MLA6_LEPOCLon protease homolog; Belongs to the peptidase S16 family. (848 aa)    
Predicted Functional Partners:
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.886
W5MD37_LEPOC
Trypsin domain containing 1.
  
 0.858
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit a.
 
 
 0.852
clpp
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.810
W5MSW2_LEPOC
GrpE-like 2, mitochondrial; Belongs to the GrpE family.
  
  
 0.807
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.807
W5LXI4_LEPOC
Neurochondrin.
     
 0.792
W5LZI1_LEPOC
Peroxisomal biogenesis factor 5-like a.
   
 0.746
pex5
Peroxisomal biogenesis factor 5.
   
 0.746
pex10
Peroxisomal biogenesis factor 10.
     
 0.711
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.