Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
W5NBX2_LEPOC | cdkl5 | ENSLOCP00000018131 | ENSLOCP00000009173 | Methyl CpG binding protein 2. | Cyclin-dependent kinase-like 5. | 0.643 |
W5NBX2_LEPOC | fmr1 | ENSLOCP00000018131 | ENSLOCP00000018950 | Methyl CpG binding protein 2. | Fragile X mental retardation 1. | 0.585 |
ace2 | agt | ENSLOCP00000009362 | ENSLOCP00000019014 | Angiotensin-converting enzyme. | Angiotensinogen; Belongs to the serpin family. | 0.939 |
ace2 | cdkl5 | ENSLOCP00000009362 | ENSLOCP00000009173 | Angiotensin-converting enzyme. | Cyclin-dependent kinase-like 5. | 0.539 |
agt | ace2 | ENSLOCP00000019014 | ENSLOCP00000009362 | Angiotensinogen; Belongs to the serpin family. | Angiotensin-converting enzyme. | 0.939 |
agt | cdkl5 | ENSLOCP00000019014 | ENSLOCP00000009173 | Angiotensinogen; Belongs to the serpin family. | Cyclin-dependent kinase-like 5. | 0.499 |
agt | cltrn | ENSLOCP00000019014 | ENSLOCP00000009326 | Angiotensinogen; Belongs to the serpin family. | Si:dkey-194e6.1. | 0.918 |
agt | grpr | ENSLOCP00000019014 | ENSLOCP00000009483 | Angiotensinogen; Belongs to the serpin family. | Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.711 |
cdkl5 | W5NBX2_LEPOC | ENSLOCP00000009173 | ENSLOCP00000018131 | Cyclin-dependent kinase-like 5. | Methyl CpG binding protein 2. | 0.643 |
cdkl5 | ace2 | ENSLOCP00000009173 | ENSLOCP00000009362 | Cyclin-dependent kinase-like 5. | Angiotensin-converting enzyme. | 0.539 |
cdkl5 | agt | ENSLOCP00000009173 | ENSLOCP00000019014 | Cyclin-dependent kinase-like 5. | Angiotensinogen; Belongs to the serpin family. | 0.499 |
cdkl5 | cltrn | ENSLOCP00000009173 | ENSLOCP00000009326 | Cyclin-dependent kinase-like 5. | Si:dkey-194e6.1. | 0.630 |
cdkl5 | fmr1 | ENSLOCP00000009173 | ENSLOCP00000018950 | Cyclin-dependent kinase-like 5. | Fragile X mental retardation 1. | 0.551 |
cdkl5 | grpr | ENSLOCP00000009173 | ENSLOCP00000009483 | Cyclin-dependent kinase-like 5. | Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.556 |
cdkl5 | ntng1 | ENSLOCP00000009173 | ENSLOCP00000009661 | Cyclin-dependent kinase-like 5. | Vav 3 guanine nucleotide exchange factor b. | 0.420 |
cltrn | agt | ENSLOCP00000009326 | ENSLOCP00000019014 | Si:dkey-194e6.1. | Angiotensinogen; Belongs to the serpin family. | 0.918 |
cltrn | cdkl5 | ENSLOCP00000009326 | ENSLOCP00000009173 | Si:dkey-194e6.1. | Cyclin-dependent kinase-like 5. | 0.630 |
cltrn | grpr | ENSLOCP00000009326 | ENSLOCP00000009483 | Si:dkey-194e6.1. | Gastrin-releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.506 |
fmr1 | W5NBX2_LEPOC | ENSLOCP00000018950 | ENSLOCP00000018131 | Fragile X mental retardation 1. | Methyl CpG binding protein 2. | 0.585 |
fmr1 | cdkl5 | ENSLOCP00000018950 | ENSLOCP00000009173 | Fragile X mental retardation 1. | Cyclin-dependent kinase-like 5. | 0.551 |
page 1 of 2