STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697842Annexin. (316 aa)    
Predicted Functional Partners:
LOC102684964
Protein S100; Belongs to the S-100 family.
   
 0.630
anxa1
Annexin.
  
0.600
W5NC51_LEPOC
Annexin.
  
0.600
W5NIU4_LEPOC
Uncharacterized protein.
   
  0.564
W5M2R9_LEPOC
Si:ch211-286b4.4.
    
  0.551
W5MJ72_LEPOC
Si:dkey-21a6.5.
    
  0.551
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.551
TRIO
Trio Rho guanine nucleotide exchange factor a.
    
  0.539
W5MDZ1_LEPOC
Kalirin RhoGEF kinase a.
    
  0.539
ARHGEF25
DH domain-containing protein.
    
  0.539
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.