STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MM39_LEPOCTPR_REGION domain-containing protein. (110 aa)    
Predicted Functional Partners:
leo1
Uncharacterized protein.
    
 0.934
TTC28
Tetratricopeptide repeat domain 28.
 
      0.900
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.859
LOC102693534
Uncharacterized protein.
  
 0.853
LOC102697661
Uncharacterized protein.
  
 0.853
W5M4B9_LEPOC
TNF receptor-associated protein 1.
  
 0.853
LOC102697582
TSC complex subunit 1a.
  
 0.853
hsp90aa1
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 0.853
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 0.853
W5N2L8_LEPOC
WD repeat and HMG-box DNA binding protein 1.
    
 
 0.833
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.