STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102693569Hemoglobin subunit epsilon 1; Belongs to the globin family. (147 aa)    
Predicted Functional Partners:
LOC102692770
Hemoglobin subunit alpha 2; Belongs to the globin family.
  
0.924
LOC102692967
Zgc:163057; Belongs to the globin family.
  
0.923
LOC102693166
Hemoglobin, alpha embryonic 1.3; Belongs to the globin family.
   
0.918
CYB5R4
Cytochrome b5 reductase 4.
   
 0.709
HBE1
Hemoglobin subunit epsilon 1; Belongs to the globin family.
  
  
 
0.546
LOC102694168
GLOBIN domain-containing protein; Belongs to the globin family.
  
  
 
0.546
LOC102693769
Hemoglobin subunit epsilon 1; Belongs to the globin family.
  
  
 
0.545
LOC102686436
GLOBIN domain-containing protein; Belongs to the globin family.
     
0.540
W5MA33_LEPOC
Apolipoprotein A-IV b, tandem duplicate 2.
   
  0.415
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.