STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MMS0_LEPOCBCL6 corepressor. (1845 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.768
bcl6
BCL6A transcription repressor a.
    
 
 0.763
W5N6X7_LEPOC
BCL6B transcription repressor.
    
 
 0.763
pcgf1
Polycomb group ring finger 1.
    
 
 0.749
pcgf6
Polycomb group ring finger 6.
    
 
 0.749
mllt1
MLLT1 super elongation complex subunit b.
    
 
 0.726
mllt3
MLLT3 super elongation complex subunit.
    
 
 0.726
rnf2
Ring finger protein 2.
    
 
 0.704
W5MCP8_LEPOC
Lysine (K)-specific demethylase 2Ba.
    
 0.669
W5MNT5_LEPOC
Lysine (K)-specific demethylase 2Aa.
    
 0.669
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.