STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MN15_LEPOCCentrosomal protein 72. (644 aa)    
Predicted Functional Partners:
W5N917_LEPOC
Pericentriolar material 1.
    
 
 0.844
dnali1
Dynein, axonemal, light intermediate chain 1.
   
    0.695
W5M5Y9_LEPOC
Si:dkey-188g12.1.
   
    0.688
ttll9
Tubulin tyrosine ligase-like family, member 9.
   
    0.688
clg2h2orf81
Uncharacterized protein.
   
    0.688
W5N0Z4_LEPOC
HAUS6_N domain-containing protein.
     
 0.677
W5MZT8_LEPOC
Bora aurora kinase A activator.
   
 
  0.635
plk4
Polo-like kinase 4 (Drosophila).
     
 0.601
CCDC14
Coiled-coil domain containing 14.
    
 
 0.553
cep290
Centrosomal protein 290.
    
 
 0.546
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.